Scientific desktop and online software

BioAtlas tools for scientific analysis and resource management

BioAtlas develops desktop and online research software for behavioral, physiological, and RNA-seq data analysis, event annotation, summary export, cohort-level workflows, and shared resource scheduling.

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Desktop and online tools

Pasta Bite, VFSS, and Behavior process research files locally. GenomeSeq provides online RNA-seq workflows, while Equiply securely manages shared resources, schedules, and reservations.

Tools

Pasta Bite Analysis Tool

A Windows desktop tool for analyzing pasta biting, chewing, and gnawing behavior from synchronized video and audio recordings.

Load and review local video and audio files together.
Navigate synchronized video and waveform views.
Mark biting, chewing, and gnawing events.
Review assisted detections and refine event timing.
Export event summaries and run cohort-level statistics.

Download from Microsoft Store

VFSS Analysis Tool

A Windows desktop tool for frame-based review and measurement of local VFSS research videos.

Open local VFSS video files without uploading them.
Step through recordings frame by frame.
Record timing, measurements, and observations.
Revisit saved analyses and refine entries.
Export structured results for research workflows.

Multi-Assay Behavioral Computational Tool

A Windows desktop tool for structured multi-assay behavioral analysis, reproducible project workflows, and research-output review.

Inspect compatible workbooks before analysis.
Save and reopen protected .behav projects.
Run the established workflow with progress tracking and logs.
Review statistics, post hoc results, effect sizes, and figures.
Rebuild editable publication figures from computed outputs.

Download from Microsoft Store

GenomeSeq

A secure, AI-supported online workspace for organizing RNA-seq projects and running established analysis workflows.

Manage projects, samples, references, uploads, and results.
Run Salmon, STAR, or HISAT2-based workflows.
Review quality-control outputs and reproducibility bundles.
Request limited access during the current testing phase.

Equiply

A secure web application for scheduling and managing shared resources across businesses, research teams, and other organizations.

View availability in a color-coded calendar.
Prevent overlapping reservations automatically.
Manage members, administrators, approvals, and maintenance.
Start free with up to 10 members and 10 equipment items.